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IRF5

This gene encodes a member of the interferon regulatory factor (IRF) family, a group of transcription factors with diverse roles, including virus-mediated activation of interferon, and modulation of cell growth, differentiation, apoptosis, and immune system activity. Members of the IRF family are characterized by a conserved N-terminal DNA-binding domain containing tryptophan (W) repeats. Alternative promoter use and alternative splicing result in multiple transcript variants, and a 30-nt indel polymorphism (SNP rs60344245) can result in loss of a 10-aa segment. [provided by RefSeq, Dec 2016]
Full Name
Interferon Regulatory Factor 5
Function
Transcription factor that plays a critical role in innate immunity by activating expression of type I interferon (IFN) IFNA and INFB and inflammatory cytokines downstream of endolysosomal toll-like receptors TLR7, TLR8 and TLR9 (PubMed:11303025, PubMed:15695821, PubMed:22412986, PubMed:25326418, PubMed:32433612).
Regulates the transcription of type I IFN genes (IFN-alpha and IFN-beta) and IFN-stimulated genes (ISG) by binding to an interferon-stimulated response element (ISRE) in their promoters (By similarity).
Can efficiently activate both the IFN-beta (IFNB) and the IFN-alpha (IFNA) genes and mediate their induction downstream of the TLR-activated, MyD88-dependent pathway (By similarity).
Key transcription factor regulating the IFN response during SARS-CoV-2 infection (PubMed:33440148).
Biological Process
Cytokine-mediated signaling pathwayManual Assertion Based On ExperimentIDA:UniProtKB
Defense response to virusIEA:UniProtKB-KW
Immune system processManual Assertion Based On ExperimentIBA:GO_Central
Inflammatory responseIEA:UniProtKB-KW
Innate immune responseISS:UniProtKB
Positive regulation of apoptotic processManual Assertion Based On ExperimentIMP:BHF-UCL
Positive regulation of interferon-alpha production1 PublicationIC:BHF-UCL
Positive regulation of interferon-beta production1 PublicationIC:BHF-UCL
Positive regulation of interleukin-12 production1 PublicationIC:BHF-UCL
Positive regulation of transcription by RNA polymerase IIManual Assertion Based On ExperimentIDA:UniProtKB
Positive regulation of type I interferon productionManual Assertion Based On ExperimentIDA:UniProtKB
Regulation of transcription by RNA polymerase IIManual Assertion Based On ExperimentIBA:GO_Central
Response to muramyl dipeptideManual Assertion Based On ExperimentIDA:BHF-UCL
Response to peptidoglycanManual Assertion Based On ExperimentIDA:BHF-UCL
Cellular Location
Cytoplasm; Nucleus. Shuttles between the nucleus and the cytoplasm: upon activation by the TLR adapter MYD88 and subsequent phosphorylation, translocates to the nucleus.
Involvement in disease
Inflammatory bowel disease 14 (IBD14):
A chronic, relapsing inflammation of the gastrointestinal tract with a complex etiology. It is subdivided into Crohn disease and ulcerative colitis phenotypes. Crohn disease may affect any part of the gastrointestinal tract from the mouth to the anus, but most frequently it involves the terminal ileum and colon. Bowel inflammation is transmural and discontinuous; it may contain granulomas or be associated with intestinal or perianal fistulas. In contrast, in ulcerative colitis, the inflammation is continuous and limited to rectal and colonic mucosal layers; fistulas and granulomas are not observed. Both diseases include extraintestinal inflammation of the skin, eyes, or joints.
Systemic lupus erythematosus 10 (SLEB10):
A chronic, relapsing, inflammatory, and often febrile multisystemic disorder of connective tissue, characterized principally by involvement of the skin, joints, kidneys and serosal membranes. It is of unknown etiology, but is thought to represent a failure of the regulatory mechanisms of the autoimmune system. The disease is marked by a wide range of system dysfunctions, an elevated erythrocyte sedimentation rate, and the formation of LE cells in the blood or bone marrow.
Rheumatoid arthritis (RA):
An inflammatory disease with autoimmune features and a complex genetic component. It primarily affects the joints and is characterized by inflammatory changes in the synovial membranes and articular structures, widespread fibrinoid degeneration of the collagen fibers in mesenchymal tissues, and by atrophy and rarefaction of bony structures.
PTM
Phosphorylation of serine and threonine residues by IKBKB in a C-terminal autoinhibitory region, stimulates dimerization, transport into the nucleus, assembly with the coactivator CBP/EP300 and initiation of transcription.
'Lys-63'-linked polyubiquitination by TRAF6 is required for activation.

Anti-IRF5 antibodies

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Target: IRF5
Host: Mouse
Antibody Isotype: IgG2a
Specificity: Human, Mouse
Clone: A658
Application*: ELISA, IF, IHC, WB
Target: IRF5
Host: Mouse
Antibody Isotype: IgG2a
Specificity: Human, Mouse
Clone: CF246
Application*: ELISA, WB
Target: IRF5
Host: Rabbit
Antibody Isotype: IgG
Specificity: Human
Clone: E1N9G
Application*: WB, IP, IF (IC), F
Target: IRF5
Host: Mouse
Antibody Isotype: IgG1, κ
Specificity: Human, Mouse
Clone: 1H6
Application*: WB, E
Target: IRF5
Host: Mouse
Antibody Isotype: IgG1
Specificity: Human
Clone: CBYY-I1947
Application*: WB, IH
Target: IRF5
Host: Mouse
Antibody Isotype: IgG1
Specificity: Human
Clone: CBYY-I1902
Application*: WB
Target: IRF5
Host: Mouse
Antibody Isotype: IgG2a
Specificity: Human
Clone: CBYY-I1893
Application*: WB
Target: IRF5
Host: Rabbit
Antibody Isotype: IgG
Specificity: Mouse
Clone: CBYY-I1792
Application*: IF
Target: IRF5
Host: Mouse
Antibody Isotype: IgG1, κ
Specificity: Human
Clone: CBYY-I0835
Application*: F
Target: IRF5
Host: Rat
Antibody Isotype: IgG2b
Specificity: Mouse
Clone: 903430
Application*: IS, F, MC
Target: IRF5
Host: Mouse
Antibody Isotype: IgG1, κ
Specificity: Human
Clone: 2G9
Application*: E, P, WB
Target: IRF5
Host: Mouse
Antibody Isotype: IgG1
Specificity: Human
Clone: 1G7
Application*: P, WB
More Infomation
For Research Use Only. Not For Clinical Use.
(P): Predicted
* Abbreviations
IFImmunofluorescence
IHImmunohistochemistry
IPImmunoprecipitation
WBWestern Blot
EELISA
MMicroarray
CIChromatin Immunoprecipitation
FFlow Cytometry
FNFunction Assay
IDImmunodiffusion
RRadioimmunoassay
TCTissue Culture
GSGel Supershift
NNeutralization
BBlocking
AActivation
IInhibition
DDepletion
ESELISpot
DBDot Blot
MCMass Cytometry/CyTOF
CTCytotoxicity
SStimulation
AGAgonist
APApoptosis
IMImmunomicroscopy
BABioassay
CSCostimulation
EMElectron Microscopy
IEImmunoelectrophoresis
PAPeptide Array
ICImmunocytochemistry
PEPeptide ELISA
MDMeDIP
SHIn situ hybridization
IAEnzyme Immunoassay
SEsandwich ELISA
PLProximity Ligation Assay
ECELISA(Cap)
EDELISA(Det)
BIBioimaging
IOImmunoassay
LFLateral Flow Immunoassay
LALuminex Assay
CImmunohistochemistry-Frozen Sections
PImmunohistologyp-Paraffin Sections
ISIntracellular Staining for Flow Cytometry
MSElectrophoretic Mobility Shift Assay
RIRNA Binding Protein Immunoprecipitation (RIP)
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