XRCC5
The protein encoded by this gene is the 80-kilodalton subunit of the Ku heterodimer protein which is also known as ATP-dependant DNA helicase II or DNA repair protein XRCC5. Ku is the DNA-binding component of the DNA-dependent protein kinase, and it functions together with the DNA ligase IV-XRCC4 complex in the repair of DNA double-strand break by non-homologous end joining and the completion of V(D)J recombination events. This gene functionally complements Chinese hamster xrs-6, a mutant defective in DNA double-strand break repair and in ability to undergo V(D)J recombination. A rare microsatellite polymorphism in this gene is associated with cancer in patients of varying radiosensitivity. [provided by RefSeq, Jul 2008]
Full Name
X-Ray Repair Cross Complementing 5
Function
Single-stranded DNA-dependent ATP-dependent helicase that plays a key role in DNA non-homologous end joining (NHEJ) by recruiting DNA-PK to DNA (PubMed:7957065, PubMed:8621488, PubMed:12145306, PubMed:11493912).
Required for double-strand break repair and V(D)J recombination (PubMed:7957065, PubMed:8621488, PubMed:12145306, PubMed:11493912).
Also has a role in chromosome translocation (PubMed:7957065, PubMed:8621488, PubMed:12145306, PubMed:11493912).
The DNA helicase II complex binds preferentially to fork-like ends of double-stranded DNA in a cell cycle-dependent manner (PubMed:7957065, PubMed:8621488, PubMed:12145306, PubMed:11493912).
It works in the 3'-5' direction (PubMed:7957065, PubMed:8621488, PubMed:12145306, PubMed:11493912).
During NHEJ, the XRCC5-XRRC6 dimer performs the recognition step: it recognizes and binds to the broken ends of the DNA and protects them from further resection (PubMed:7957065, PubMed:8621488, PubMed:12145306, PubMed:11493912).
Binding to DNA may be mediated by XRCC6 (PubMed:7957065, PubMed:8621488, PubMed:12145306, PubMed:11493912).
The XRCC5-XRRC6 dimer acts as regulatory subunit of the DNA-dependent protein kinase complex DNA-PK by increasing the affinity of the catalytic subunit PRKDC to DNA by 100-fold (PubMed:7957065, PubMed:8621488, PubMed:12145306, PubMed:20383123, PubMed:11493912).
The XRCC5-XRRC6 dimer is probably involved in stabilizing broken DNA ends and bringing them together (PubMed:7957065, PubMed:8621488, PubMed:12145306, PubMed:20383123).
The assembly of the DNA-PK complex to DNA ends is required for the NHEJ ligation step (PubMed:7957065, PubMed:8621488, PubMed:12145306, PubMed:20383123).
The XRCC5-XRRC6 dimer probably also acts as a 5'-deoxyribose-5-phosphate lyase (5'-dRP lyase), by catalyzing the beta-elimination of the 5' deoxyribose-5-phosphate at an abasic site near double-strand breaks (PubMed:20383123).
XRCC5 probably acts as the catalytic subunit of 5'-dRP activity, and allows to 'clean' the termini of abasic sites, a class of nucleotide damage commonly associated with strand breaks, before such broken ends can be joined (PubMed:20383123).
The XRCC5-XRRC6 dimer together with APEX1 acts as a negative regulator of transcription (PubMed:8621488).
In association with NAA15, the XRCC5-XRRC6 dimer binds to the osteocalcin promoter and activates osteocalcin expression (PubMed:12145306).
As part of the DNA-PK complex, involved in the early steps of ribosome assembly by promoting the processing of precursor rRNA into mature 18S rRNA in the small-subunit processome (PubMed:32103174).
Binding to U3 small nucleolar RNA, recruits PRKDC and XRCC5/Ku86 to the small-subunit processome (PubMed:32103174).
Plays a role in the regulation of DNA virus-mediated innate immune response by assembling into the HDP-RNP complex, a complex that serves as a platform for IRF3 phosphorylation and subsequent innate immune response activation through the cGAS-STING pathway (PubMed:28712728).
Required for double-strand break repair and V(D)J recombination (PubMed:7957065, PubMed:8621488, PubMed:12145306, PubMed:11493912).
Also has a role in chromosome translocation (PubMed:7957065, PubMed:8621488, PubMed:12145306, PubMed:11493912).
The DNA helicase II complex binds preferentially to fork-like ends of double-stranded DNA in a cell cycle-dependent manner (PubMed:7957065, PubMed:8621488, PubMed:12145306, PubMed:11493912).
It works in the 3'-5' direction (PubMed:7957065, PubMed:8621488, PubMed:12145306, PubMed:11493912).
During NHEJ, the XRCC5-XRRC6 dimer performs the recognition step: it recognizes and binds to the broken ends of the DNA and protects them from further resection (PubMed:7957065, PubMed:8621488, PubMed:12145306, PubMed:11493912).
Binding to DNA may be mediated by XRCC6 (PubMed:7957065, PubMed:8621488, PubMed:12145306, PubMed:11493912).
The XRCC5-XRRC6 dimer acts as regulatory subunit of the DNA-dependent protein kinase complex DNA-PK by increasing the affinity of the catalytic subunit PRKDC to DNA by 100-fold (PubMed:7957065, PubMed:8621488, PubMed:12145306, PubMed:20383123, PubMed:11493912).
The XRCC5-XRRC6 dimer is probably involved in stabilizing broken DNA ends and bringing them together (PubMed:7957065, PubMed:8621488, PubMed:12145306, PubMed:20383123).
The assembly of the DNA-PK complex to DNA ends is required for the NHEJ ligation step (PubMed:7957065, PubMed:8621488, PubMed:12145306, PubMed:20383123).
The XRCC5-XRRC6 dimer probably also acts as a 5'-deoxyribose-5-phosphate lyase (5'-dRP lyase), by catalyzing the beta-elimination of the 5' deoxyribose-5-phosphate at an abasic site near double-strand breaks (PubMed:20383123).
XRCC5 probably acts as the catalytic subunit of 5'-dRP activity, and allows to 'clean' the termini of abasic sites, a class of nucleotide damage commonly associated with strand breaks, before such broken ends can be joined (PubMed:20383123).
The XRCC5-XRRC6 dimer together with APEX1 acts as a negative regulator of transcription (PubMed:8621488).
In association with NAA15, the XRCC5-XRRC6 dimer binds to the osteocalcin promoter and activates osteocalcin expression (PubMed:12145306).
As part of the DNA-PK complex, involved in the early steps of ribosome assembly by promoting the processing of precursor rRNA into mature 18S rRNA in the small-subunit processome (PubMed:32103174).
Binding to U3 small nucleolar RNA, recruits PRKDC and XRCC5/Ku86 to the small-subunit processome (PubMed:32103174).
Plays a role in the regulation of DNA virus-mediated innate immune response by assembling into the HDP-RNP complex, a complex that serves as a platform for IRF3 phosphorylation and subsequent innate immune response activation through the cGAS-STING pathway (PubMed:28712728).
Biological Process
Biological Process activation of innate immune response Source:UniProtKB1 Publication
Biological Process brain development Source:Ensembl
Biological Process cellular hyperosmotic salinity response Source:Ensembl
Biological Process cellular response to DNA damage stimulus Source:UniProtKB1 Publication
Biological Process cellular response to fatty acid Source:Ensembl
Biological Process cellular response to gamma radiation Source:UniProtKB1 Publication
Biological Process cellular response to leukemia inhibitory factor Source:Ensembl
Biological Process cellular response to X-ray Source:GO_Central1 Publication
Biological Process DNA recombination Source:ProtInc1 Publication
Biological Process double-strand break repair Source:BHF-UCL1 Publication
Biological Process double-strand break repair via nonhomologous end joining Source:UniProtKB1 Publication
Biological Process hematopoietic stem cell differentiation Source:Ensembl
Biological Process hematopoietic stem cell proliferation Source:Ensembl
Biological Process innate immune response Source:UniProtKB-KW
Biological Process negative regulation of DNA-templated transcription Source:UniProtKB1 Publication
Biological Process negative regulation of t-circle formation Source:BHF-UCL1 Publication
Biological Process neurogenesis Source:Ensembl
Biological Process positive regulation of catalytic activity Source:BHF-UCL1 Publication
Biological Process positive regulation of neurogenesis Source:Ensembl
Biological Process positive regulation of protein kinase activity Source:CAFA1 Publication
Biological Process positive regulation of telomerase activity Source:BHF-UCL1 Publication
Biological Process positive regulation of telomere maintenance via telomerase Source:BHF-UCL1 Publication
Biological Process protein localization to chromosome, telomeric region Source:BHF-UCL1 Publication
Biological Process recombinational repair Source:ComplexPortal1 Publication
Biological Process regulation of smooth muscle cell proliferation Source:UniProtKB1 Publication
Biological Process regulation of telomere maintenance Source:BHF-UCL3 Publications
Biological Process response to xenobiotic stimulus Source:Ensembl
Biological Process small-subunit processome assembly Source:UniProtKB1 Publication
Biological Process telomere maintenance Source:GO_Central1 Publication
Biological Process brain development Source:Ensembl
Biological Process cellular hyperosmotic salinity response Source:Ensembl
Biological Process cellular response to DNA damage stimulus Source:UniProtKB1 Publication
Biological Process cellular response to fatty acid Source:Ensembl
Biological Process cellular response to gamma radiation Source:UniProtKB1 Publication
Biological Process cellular response to leukemia inhibitory factor Source:Ensembl
Biological Process cellular response to X-ray Source:GO_Central1 Publication
Biological Process DNA recombination Source:ProtInc1 Publication
Biological Process double-strand break repair Source:BHF-UCL1 Publication
Biological Process double-strand break repair via nonhomologous end joining Source:UniProtKB1 Publication
Biological Process hematopoietic stem cell differentiation Source:Ensembl
Biological Process hematopoietic stem cell proliferation Source:Ensembl
Biological Process innate immune response Source:UniProtKB-KW
Biological Process negative regulation of DNA-templated transcription Source:UniProtKB1 Publication
Biological Process negative regulation of t-circle formation Source:BHF-UCL1 Publication
Biological Process neurogenesis Source:Ensembl
Biological Process positive regulation of catalytic activity Source:BHF-UCL1 Publication
Biological Process positive regulation of neurogenesis Source:Ensembl
Biological Process positive regulation of protein kinase activity Source:CAFA1 Publication
Biological Process positive regulation of telomerase activity Source:BHF-UCL1 Publication
Biological Process positive regulation of telomere maintenance via telomerase Source:BHF-UCL1 Publication
Biological Process protein localization to chromosome, telomeric region Source:BHF-UCL1 Publication
Biological Process recombinational repair Source:ComplexPortal1 Publication
Biological Process regulation of smooth muscle cell proliferation Source:UniProtKB1 Publication
Biological Process regulation of telomere maintenance Source:BHF-UCL3 Publications
Biological Process response to xenobiotic stimulus Source:Ensembl
Biological Process small-subunit processome assembly Source:UniProtKB1 Publication
Biological Process telomere maintenance Source:GO_Central1 Publication
Cellular Location
Nucleus
Nucleus, nucleolus
Chromosome
Nucleus, nucleolus
Chromosome
PTM
ADP-ribosylated by PARP3.
Phosphorylated on serine residues. Phosphorylation by PRKDC may enhance helicase activity.
Sumoylated.
Ubiquitinated by RNF8 via 'Lys-48'-linked ubiquitination following DNA damage, leading to its degradation and removal from DNA damage sites (PubMed:22266820).
Ubiquitinated by RNF138, leading to remove the Ku complex from DNA breaks (PubMed:26502055).
Phosphorylated on serine residues. Phosphorylation by PRKDC may enhance helicase activity.
Sumoylated.
Ubiquitinated by RNF8 via 'Lys-48'-linked ubiquitination following DNA damage, leading to its degradation and removal from DNA damage sites (PubMed:22266820).
Ubiquitinated by RNF138, leading to remove the Ku complex from DNA breaks (PubMed:26502055).
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Anti-XRCC5 antibodies
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Target: XRCC5
Host: Mouse
Antibody Isotype: IgG1, κ
Specificity: Human
Clone: 3D8
Application*: WB, E
Target: XRCC5
Host: Mouse
Antibody Isotype: IgG1
Specificity: Human, Monkey
Clone: 8H1-C3-G10
Application*: WB, IF, IP
Target: XRCC5
Host: Mouse
Antibody Isotype: IgG
Specificity: Mouse, Rat
Clone: CBLY1-179
Application*: WB, IP, IF, E
Target: XRCC5
Host: Rabbit
Antibody Isotype: IgG
Specificity: Human
Clone: S.669.4
Application*: IC, IF, C, P, IP, WB
Target: XRCC5
Host: Rabbit
Antibody Isotype: IgG
Specificity: Human
Clone: C48E7
Application*: F, IF, IH, IP, WB
Target: XRCC5
Host: Mouse
Antibody Isotype: IgG2b
Specificity: Human
Clone: 6.4_1A2
Application*: IP, IC/IF
Target: XRCC5
Host: Mouse
Antibody Isotype: IgG1
Specificity: Human, Monkey
Clone: 0.N.377
Application*: E, F, IF, IP, WB
Target: XRCC5
Host: Mouse
Antibody Isotype: IgG1
Specificity: Human
Clone: 7/Ku80
Application*: WB, IF
Target: XRCC5
Host: Rabbit
Antibody Isotype: IgG
Specificity: Human
Clone: CBLY1-012
Application*: WB
Target: XRCC5
Host: Mouse
Antibody Isotype: IgG
Specificity: Human
Clone: 149.8
Application*: IH, WB
Target: XRCC5
Host: Mouse
Antibody Isotype: IgG1
Specificity: Human
Clone: CBYCX-137
Application*: E, P, WB
Target: XRCC5
Host: Mouse
Antibody Isotype: IgG1
Specificity: Human
Clone: CBYCX-136
Application*: E, F, GS, IF, IH, IP, WB
Target: XRCC5
Host: Mouse
Antibody Isotype: IgG
Specificity: Human, Monkey
Clone: 8H1
Application*: IF, IP, WB
Target: XRCC5
Host: Mouse
Antibody Isotype: IgG
Specificity: Human
Clone: 8C358
Application*: F, ICC, IP, WB
Target: XRCC5
Host: Mouse
Antibody Isotype: IgG1, κ
Specificity: Human
Clone: F3
Application*: IF, WB
Target: XRCC5
Host: Mouse
Antibody Isotype: IgG1
Specificity: Human, Monkey
Clone: 8H1-C3-G10
Application*: WB, IF, IP
Target: XRCC5
Host: Mouse
Antibody Isotype: IgG1
Specificity: Human, Mouse
Clone: 5C5
Application*: E, WB, P, ICC, IF, F
Target: XRCC5
Host: Mouse
Antibody Isotype: IgG1
Specificity: Human
Clone: 11C965
Application*: E, WB, IH
Target: XRCC5
Host: Mouse
Antibody Isotype: IgG2a
Specificity: Human
Clone: 10F23
Application*: IP
Target: XRCC5
Host: Mouse
Antibody Isotype: IgG2a
Specificity: Human, Mouse, Rat
Clone: CBYCX-135
Application*: WB, E
Target: XRCC5
Host: Mouse
Antibody Isotype: IgG2a, κ
Specificity: Human
Clone: CBYCX-134
Application*: E
Target: XRCC5
Host: Mouse
Antibody Isotype: IgG1
Specificity: Human
Clone: CBYCX-133
Application*: F, ICC, IP, WB
Target: XRCC5
Host: Mouse
Antibody Isotype: IgG2a
Specificity: Human
Clone: CBYCX-132
Application*: E, WB
Target: XRCC5
Host: Mouse
Antibody Isotype: IgG1
Specificity: Human
Clone: CBYCX-131
Application*: WB
Target: XRCC5
Host: Mouse
Antibody Isotype: IgG
Specificity: Human
Clone: 9403
Application*: P, WB
Target: XRCC5
Host: Mouse
Antibody Isotype: IgG2a
Specificity: Human
Clone: MEM-54
Application*: ICC, IP
Target: XRCC5
Host: Mouse
Antibody Isotype: IgG2a
Specificity: Human
Clone: CBYCX-130
Application*: IP
Target: XRCC5
Host: Mouse
Antibody Isotype: IgG1
Specificity: Human, Monkey
Clone: 610-705
Application*: F, IF, IP, WB
Target: XRCC5
Host: Mouse
Antibody Isotype: IgG1
Specificity: Human, Monkey
Clone: 111
Application*: F, IP, WB
Target: XRCC5
Host: Rabbit
Antibody Isotype: IgG
Specificity: Human, Cattle, Mouse, Rat
Clone: SP130
Application*: P, WB
Target: XRCC5
Host: Mouse
Antibody Isotype: IgG1
Specificity: Human
Clone: 3241C1a
Application*: DB, ICC, IP, WB, F
Target: XRCC5
Host: Mouse
Antibody Isotype: IgG1
Specificity: Human, Mouse
Clone: 13B805
Application*: E, F, IH, WB
Target: XRCC5
Host: Rabbit
Antibody Isotype: IgG
Specificity: Human
Clone: 5G3
Application*: E, WB, IH, IF
Target: XRCC5
Host: Mouse
Antibody Isotype: IgG
Specificity: Human, Mouse
Clone: CBT824
Application*: WB, P, IF, IC, F, E
Target: XRCC5
Host: Mouse
Antibody Isotype: IgG1
Specificity: Human, Mouse
Clone: CBT2525
Application*: WB, IH, IC, F
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For Research Use Only. Not For Clinical Use.
(P): Predicted
* Abbreviations
- AActivation
- AGAgonist
- APApoptosis
- BBlocking
- BABioassay
- BIBioimaging
- CImmunohistochemistry-Frozen Sections
- CIChromatin Immunoprecipitation
- CTCytotoxicity
- CSCostimulation
- DDepletion
- DBDot Blot
- EELISA
- ECELISA(Cap)
- EDELISA(Det)
- ESELISpot
- EMElectron Microscopy
- FFlow Cytometry
- FNFunction Assay
- GSGel Supershift
- IInhibition
- IAEnzyme Immunoassay
- ICImmunocytochemistry
- IDImmunodiffusion
- IEImmunoelectrophoresis
- IFImmunofluorescence
- IGImmunochromatography
- IHImmunohistochemistry
- IMImmunomicroscopy
- IOImmunoassay
- IPImmunoprecipitation
- ISIntracellular Staining for Flow Cytometry
- LALuminex Assay
- LFLateral Flow Immunoassay
- MMicroarray
- MCMass Cytometry/CyTOF
- MDMeDIP
- MSElectrophoretic Mobility Shift Assay
- NNeutralization
- PImmunohistologyp-Paraffin Sections
- PAPeptide Array
- PEPeptide ELISA
- PLProximity Ligation Assay
- RRadioimmunoassay
- SStimulation
- SESandwich ELISA
- SHIn situ hybridization
- TCTissue Culture
- WBWestern Blot
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