Rabbit Anti-CDYL Recombinant Antibody (CBXC-0356) (CBMAB-C5900-CQ)

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Basic Information

Host Animal
Rabbit
Clone
CBXC-0356
Application
WB, IP
Immunogen
HEPES, pH 7.5, 100 µg/ml BSA, 50% glycerol
Host Species
Rabbit
Specificity
Human, Mouse, Rat, Monkey
Antibody Isotype
IgG
Clonality
Monoclonal Antibody
Application Notes
The COA includes recommended starting dilutions, optimal dilutions should be determined by the end user.
ApplicationNote
WB1:1,000
IP1:100

Formulations & Storage [For reference only, actual COA shall prevail!]

Format
Liquid
Buffer
HEPES, pH 7.5, 100 µg/ml BSA, 50% glycerol
Preservative
0.02% sodium azide
Concentration
Batch dependent
Storage
Store at +4°C short term (1-2 weeks). Aliquot and store at -20°C long term. Avoid repeated freeze/thaw cycles.
More Infomation

Target

Full Name
chromodomain protein, Y-like
Introduction
Chromodomain Y is a primate-specific Y-chromosomal gene family expressed exclusively in the testis and implicated in infertility. Although the Y-linked genes are testis-specific, this autosomal gene is ubiquitously expressed. The Y-linked genes arose by retrotransposition of an mRNA from this gene, followed by amplification of the retroposed gene. Proteins encoded by this gene superfamily possess a chromodomain, a motif implicated in chromatin binding and gene suppression, and a catalytic domain believed to be involved in histone acetylation. Multiple proteins are encoded by transcript variants of this gene.
Entrez Gene ID
UniProt ID
Alternative Names
Chromodomain Y Like; Testis-Specific Chromodomain Y-Like Protein; Chromodomain Protein, Y-Like; Crotonyl-CoA Hydratase; CDY-Like, Autosomal; CDYL1;
Function
Isoform 2:
Chromatin reader protein that recognizes and binds histone H3 trimethylated at 'Lys-9', dimethylated at 'Lys-27' and trimethylated at 'Lys-27' (H3K9me3, H3K27me2 and H3K27me3, respectively) (PubMed:19808672, PubMed:28402439).
Part of multimeric repressive chromatin complexes, where it is required for transmission and restoration of repressive histone marks, thereby preserving the epigenetic landscape (PubMed:28402439).
Required for chromatin targeting and maximal enzymatic activity of Polycomb repressive complex 2 (PRC2); acts as a positive regulator of PRC2 activity by bridging the pre-existing histone H3K27me3 and newly recruited PRC2 on neighboring nucleosomes (PubMed:22009739).
Acts as a corepressor for REST by facilitating histone-lysine N-methyltransferase EHMT2 recruitment and H3K9 dimethylation at REST target genes for repression (PubMed:19061646).
Involved in X chromosome inactivation in females: recruited to Xist RNA-coated X chromosome and facilitates propagation of H3K9me2 by anchoring EHMT2 (By similarity).
Promotes EZH2 accumulation and H3K27me3 methylation at DNA double strand breaks (DSBs), thereby facilitating transcriptional repression at sites of DNA damage and homology-directed repair of DSBs (PubMed:29177481).
Required for neuronal migration during brain development by repressing expression of RHOA (By similarity).
By repressing the expression of SCN8A, contributes to the inhibition of intrinsic neuronal excitability and epileptogenesis (By similarity).
In addition to acting as a chromatin reader, acts as a hydro-lyase (PubMed:28803779).
Shows crotonyl-coA hydratase activity by mediating the conversion of crotonyl-CoA ((2E)-butenoyl-CoA) to beta-hydroxybutyryl-CoA (3-hydroxybutanoyl-CoA), thereby acting as a negative regulator of histone crotonylation (PubMed:28803779).
Histone crotonylation is required during spermatogenesis; down-regulation of histone crotonylation by CDYL regulates the reactivation of sex chromosome-linked genes in round spermatids and histone replacement in elongating spermatids (By similarity).
By regulating histone crotonylation and trimethylation of H3K27, may be involved in stress-induced depression-like behaviors, possibly by regulating VGF expression (By similarity).
Isoform 1:
Not able to recognize and bind histone H3K9me3, histone H3K27me2 and histone H3K27me3, due to the presence of a N-terminal extension that inactivates the chromo domain (PubMed:19808672).
Isoform 3:
Not able to recognize and bind histone H3K9me3, histone H3K27me2 and histone H3K27me3, due to the absence of the chromo domain (PubMed:19808672).
Acts as a negative regulator of isoform 2 by displacing isoform 2 from chromatin.
Biological Process
Negative regulation of peptidyl-lysine crotonylation Source: UniProtKB
Random inactivation of X chromosome Source: UniProtKB
Spermatid development Source: UniProtKB
Spermatogenesis Source: ProtInc
Cellular Location
Isoform 2: Nucleus; Chromosome. Recognizes and binds histone H3 trimethylated at 'Lys-9', dimethylated at 'Lys-27' and trimethylated at 'Lys-27' (H3K9me3, H3K27me2 and H3K27me3, respectively) on chromatin (PubMed:19808672). Multimerization is required for chromatin-binding (PubMed:19808672). Recruited to sites of DNA double strand breaks in a PARP1-dependent fashion (PubMed:29177481).

Wei, Y., Chen, X., Liang, C., Ling, Y., Yang, X., Ye, X., ... & Wang, H. (2020). A noncoding regulatory RNAs network driven by Circ‐CDYL acts specifically in the early stages hepatocellular carcinoma. Hepatology, 71(1), 130-147.

Yu, H., Bu, C., Liu, Y., Gong, T., Liu, X., Liu, S., ... & Liang, J. (2020). Global crotonylome reveals CDYL-regulated RPA1 crotonylation in homologous recombination–mediated DNA repair. Science advances, 6(11), eaay4697.

Liu, Y., Li, M., Fan, M., Song, Y., Yu, H., Zhi, X., ... & Huang, Z. (2019). Chromodomain Y-like protein–mediated histone crotonylation regulates stress-induced depressive behaviors. Biological psychiatry, 85(8), 635-649.

Yang, L., Liu, Y., Fan, M., Zhu, G., Jin, H., Liang, J., ... & Zhang, L. (2019). Identification and characterization of benzo [d] oxazol-2 (3H)-one derivatives as the first potent and selective small-molecule inhibitors of chromodomain protein CDYL. European journal of medicinal chemistry, 182, 111656.

Qiu, Z., Zhu, W., Meng, H., Tong, L., Li, X., Luo, P., ... & Zhang, J. (2019). CDYL promotes the chemoresistance of small cell lung cancer by regulating H3K27 trimethylation at the CDKN1C promoter. Theranostics, 9(16), 4717.

Xia, X., Zhou, X., Quan, Y., Hu, Y., Xing, F., Li, Z., ... & Zhang, A. (2019). Germline deletion of Cdyl causes teratozoospermia and progressive infertility in male mice. Cell death & disease, 10(3), 1-13.

Liu, Y., Lai, S., Ma, W., Ke, W., Zhang, C., Liu, S., ... & Huang, Z. (2017). CDYL suppresses epileptogenesis in mice through repression of axonal Nav1. 6 sodium channel expression. Nature communications, 8(1), 1-17.

Liu, S., Yu, H., Liu, Y., Liu, X., Zhang, Y., Bu, C., ... & Shang, Y. (2017). Chromodomain protein CDYL acts as a crotonyl-CoA hydratase to regulate histone crotonylation and spermatogenesis. Molecular cell, 67(5), 853-866.

Liu, Y., Liu, S., Yuan, S., Yu, H., Zhang, Y., Yang, X., ... & Liang, J. (2017). Chromodomain protein CDYL is required for transmission/restoration of repressive histone marks. Journal of molecular cell biology, 9(3), 178-194.

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For research use only. Not intended for any clinical use.

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